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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843261.1_cds_XP_016508655.1_21655
CDS Infomation

[gene=LOC107826218] [db_xref=GeneID:107826218] [protein=auxin response factor 4-like] [protein_id=XP_016508655.1] [location=join(7208..7588,7691..7747,8037..8222,8326..8410,8478..8568,8821..8985,16109..16228,16306..16381,17087..17246,17345..18090,18173..18363,18939..19122)] [gbkey=CDS]
Sequence

ATGGAAATTGATCTGAACCATGCAATAGTAAGTGAAGTGGAGAAGAATGCATGTTGGAAT
GGAGAATGTGACAAAAGGGGTGTTGGTGGTAGTTGTGTTAATTGCAATTTGTCCACTACT
TCCACTTCTTCTTGTTCCTCAAATGCATCTTCCTCTTCTTCTTCTTCACTTGCTCTTTCC
TCAATTTACATGGAGCTTTGGCATGCTTGTGCTGGCCCTTTAACAAGCTTACCAAAGAAA
GGAAATGTAGTTGTCTATTTCCCTCAAGGTCATATGGAGGAAGCTGCTTCTGTCTCTCCT
TTTTCACCCATCAAAATGGATTTTCCAACTTTTGGTCTTCAGCCTCAGATCTTCTGTAGA
GTGGAAGATGTTCAGTTGCTTGCAAATAAGGAAAATGATGAGGTTTATACACAGCTCACT
CTTCTCCCTCTTCCAGAGTCAGTGGCTATAAGCTTAAAGGGGAAAGAACATGAAGATTTG
GGGGTGGATGAGGAAGGGAATGGAATTAATCCAGGAAAATCAGCTTCTCACATGTTCTGT
AAGACGCTGACCGCTTCTGATACCAGTACCCATGGCGGCTTTTCAGTTCCCCGTAGAGCA
GCTGAAGACTGTTTCCCACCTCTGGATTACAAAGAGCAAAGGCCATCTCAGGAGCTGATT
GCTAAGGATCTGCACGGAGTCGAGTGGAAATTTCGTCACATTTATAGAGGCCAGCCGAGA
CGACATTTGCTCACTACTGGATGGAGTATTTTTGTCAGCCAAAAGAATCTTGTCTCAGGG
GATGCAGTTCTCTTCTTGAGGGGAGAAGGCGGAGATCTCAGGCTGGGAATAAGAAGAGCT
GCTAGACCTAGAAATGGGCTTCCTGAATCGATAATCAAAAGTCAATATTCTGATTCTGAT
GTTCTTTCAGCAGTTGCTACCGCTGTGTCAGCCAAGAGTACATTCCATGTTTTCTATAGC
CCAAGGGCTAGTCATGCTGATTTTGTTGTACCGTACCAAAAGTACATGAAAAGCATCAAC
AGTCGGATTCCTGTTGGGACAAGATTTAAAATGAGATTCGATTTGGATGATTCACCTGAA
AGAAGGTACAGCGGTGTAGTGACCGGGATAAGTGATATGGATCCCTTTAGATGGCCCAAC
TCAAAATGGAGATGTTTGATGGTCAGATGGGATGATGATATCATGAGTAATCATCAAGAA
CGGGTTTCTCCATGGGAAATTGATTCTTCAGTTTCCTTACCACCACTGAGCATTCAGTCT
CCAAGACTGAAGAAACTGCGGACTAGTCAGCAGGCTCCATCATTAGACAGCCATTTTGCT
GGAGGGAGTGCTCTTTTGGACTTTGAGGAGTCGGTAAGATCCTCCAAGGTCTTGCAAGGT
CAAGAAAATTTAGGTCTGATATCGCCTCCCTATGGATGTGATAAGACAGTCCGCCCACTG
GATTTTGAGCTGCAAAATGTAGCTCGTCACAATCTCATGCCAACTGGTATAGAGAACATA
ATTGTTGGAGACTTTGTGAAAACTCAGCCTCCCACAACCTACACAGGCTTTCTGGAATCC
AATAGGTTTCCAAAGGTCTTGCAAGGTCAAGAAATTTGCTCGTTAAGATCCCTTACTGGA
AAAGGTGATGTTAATTTTGGTGCTTGGGGAAAACCTGAATTTGGTTGCAATGTTTTTAGC
ACATATCAGAGGCCGAAGACCAATTTCTATCCTCTTGCTTCTGAAGGGGCGAGGAATGTG
TTTCTACCTTATAATGCGATGTATAGAGCTGGACAAGATTCTGTAGTGCATTCCTATTTT
AATAATAATTTCCAAAGAGAAAATCCCACTTTGAGCCAGAATTCAGTCCAAAATGGGGTT
AGGAGGGAAGAAGGTGGAATGCAGAAGTTTGCAAATGAGCAGAGGCCACTGGAGATGTCC
AAATTGTCTATTCCAGAGACAAATTTCAAGAATGAGAACGGTGGCTCCTTAAATGCACAA
GCTTCTTGTAAACTATTTGGCTTTTCCTTGATTAAAGAACCCTCTACTCCTAGCTCGCAC
AGTTCTGGTAAGAGGAGCTGTACAAAGGTTCACAAACAAGGCAGCTTGGTTGGACGAGCC
ATTGATCTCTCAAGGTTGAATGGCTATGATGATTTGCTGGTTGAGTTGGAGAGGCTTTTC
AACATGGAAGACCTCCTAAGAGATCCCAATAAGGGATGGCGAATCTTGTATACCGACAGT
GAGAATGACATGATGGTTGTCGGAGACGATCCATGGCATGAGTTCTGTGAGGTAGTATCC
AAGATCCATATATACACTCAAGAAGAAGTGGAGAAAATGACAATTGAGGGGATAAGTGAT
GATACTCAAAGTTGTTTGGAGGAGGCACCGGCATTCATGGATGCCTCAAAATCTTCTTCA
GTTGGCCAGCCTGATTTTTCTCCAACTGTAATCAGGATATGA

Peptide Sequence

PEP ID

XP_016508655.1
PEP Infomation

PREDICTED: auxin response factor 4-like [Nicotiana tabacum]
Sequence

MEIDLNHAIVSEVEKNACWNGECDKRGVGGSCVNCNLSTTSTSSCSSNASSSSSSSLALS
SIYMELWHACAGPLTSLPKKGNVVVYFPQGHMEEAASVSPFSPIKMDFPTFGLQPQIFCR
VEDVQLLANKENDEVYTQLTLLPLPESVAISLKGKEHEDLGVDEEGNGINPGKSASHMFC
KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPR
RHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNGLPESIIKSQYSDSD
VLSAVATAVSAKSTFHVFYSPRASHADFVVPYQKYMKSINSRIPVGTRFKMRFDLDDSPE
RRYSGVVTGISDMDPFRWPNSKWRCLMVRWDDDIMSNHQERVSPWEIDSSVSLPPLSIQS
PRLKKLRTSQQAPSLDSHFAGGSALLDFEESVRSSKVLQGQENLGLISPPYGCDKTVRPL
DFELQNVARHNLMPTGIENIIVGDFVKTQPPTTYTGFLESNRFPKVLQGQEICSLRSLTG
KGDVNFGAWGKPEFGCNVFSTYQRPKTNFYPLASEGARNVFLPYNAMYRAGQDSVVHSYF
NNNFQRENPTLSQNSVQNGVRREEGGMQKFANEQRPLEMSKLSIPETNFKNENGGSLNAQ
ASCKLFGFSLIKEPSTPSSHSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLF
NMEDLLRDPNKGWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMTIEGISD
DTQSCLEEAPAFMDASKSSSVGQPDFSPTVIRI

Transcript Sequence

Gene sequence data has not been registered.